![[ICO]](/icons/blank.gif) | Name | Last modified | Size | Description |
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![[PARENTDIR]](/icons/back.gif) | Parent Directory | | - | |
![[TXT]](/icons/text.gif) | AS_BAT_AssemblyGraph.C | 2021-08-04 09:21 | 13K | |
| AS_BAT_AssemblyGraph.H | 2021-08-04 09:21 | 3.6K | |
| AS_BAT_BestOverlapGraph.C | 2021-08-04 09:21 | 67K | |
| AS_BAT_BestOverlapGraph.H | 2021-08-04 09:21 | 12K | |
| AS_BAT_BestOverlapGraph_implementation.H | 2021-08-04 09:21 | 2.5K | |
| AS_BAT_ChunkGraph.C | 2021-08-04 09:21 | 7.1K | |
| AS_BAT_ChunkGraph.H | 2021-08-04 09:21 | 1.4K | |
| AS_BAT_DetectSpurs.C | 2021-08-04 09:21 | 5.6K | |
| AS_BAT_DetectSpurs.H | 2021-08-04 09:21 | 932 | |
| AS_BAT_FindCircular.C | 2021-08-04 09:21 | 10K | |
| AS_BAT_FindCircular.H | 2021-08-04 09:21 | 966 | |
| AS_BAT_Instrumentation.C | 2021-08-04 09:21 | 33K | |
| AS_BAT_Instrumentation.H | 2021-08-04 09:21 | 1.2K | |
| AS_BAT_Logging.C | 2021-08-04 09:21 | 7.7K | |
| AS_BAT_Logging.H | 2021-08-04 09:21 | 2.0K | |
| AS_BAT_MarkRepeatReads.C | 2021-08-04 09:21 | 38K | |
| AS_BAT_MarkRepeatReads.H | 2021-08-04 09:21 | 1.3K | |
| AS_BAT_MergeOrphans.C | 2021-08-04 09:21 | 46K | |
| AS_BAT_MergeOrphans.H | 2021-08-04 09:21 | 963 | |
| AS_BAT_OptimizePositions.C | 2021-08-04 09:21 | 25K | |
| AS_BAT_Outputs.C | 2021-08-04 09:21 | 2.5K | |
| AS_BAT_Outputs.H | 2021-08-04 09:21 | 940 | |
| AS_BAT_OverlapCache.C | 2021-08-04 09:21 | 32K | |
| AS_BAT_OverlapCache.H | 2021-08-04 09:21 | 9.5K | |
| AS_BAT_PlaceContains.C | 2021-08-04 09:21 | 9.2K | |
| AS_BAT_PlaceContains.H | 2021-08-04 09:21 | 1.1K | |
| AS_BAT_PlaceReadUsingOverlaps.C | 2021-08-04 09:21 | 27K | |
| AS_BAT_PlaceReadUsingOverlaps.H | 2021-08-04 09:21 | 2.8K | |
| AS_BAT_PopBubbles.txt | 2021-08-04 09:21 | 3.5K | |
| AS_BAT_PopulateUnitig.C | 2021-08-04 09:21 | 7.7K | |
| AS_BAT_PopulateUnitig.H | 2021-08-04 09:21 | 823 | |
| AS_BAT_PromoteToSingleton.C | 2021-08-04 09:21 | 1.5K | |
| AS_BAT_PromoteToSingleton.H | 2021-08-04 09:21 | 745 | |
| AS_BAT_ReadInfo.C | 2021-08-04 09:21 | 2.6K | |
| AS_BAT_ReadInfo.H | 2021-08-04 09:21 | 4.7K | |
| AS_BAT_SetParentAndHang.C | 2021-08-04 09:21 | 4.9K | |
| AS_BAT_SetParentAndHang.H | 2021-08-04 09:21 | 806 | |
| AS_BAT_SplitDiscontinuous.C | 2021-08-04 09:21 | 5.3K | |
| AS_BAT_SplitDiscontinuous.H | 2021-08-04 09:21 | 802 | |
| AS_BAT_SplitTig.H | 2021-08-04 09:21 | 1.8K | |
| AS_BAT_SplitTig_AtReadEnds.C | 2021-08-04 09:21 | 12K | |
| AS_BAT_TigVector.C | 2021-08-04 09:21 | 5.3K | |
| AS_BAT_TigVector.H | 2021-08-04 09:21 | 2.0K | |
| AS_BAT_Unitig.C | 2021-08-04 09:21 | 18K | |
| AS_BAT_Unitig.H | 2021-08-04 09:21 | 12K | |
| AS_BAT_Unitig_AddRead.C | 2021-08-04 09:21 | 2.7K | |
| AS_BAT_Unitig_PlaceReadUsingEdges.C | 2021-08-04 09:21 | 10K | |
| bogart.C | 2021-08-04 09:21 | 29K | |
![[ ]](/icons/unknown.gif) | bogart.mk | 2021-08-04 09:21 | 1.1K | |
| layout-to-layout.pl | 2021-08-04 09:21 | 544 | |
| layoutReads.C | 2021-08-04 09:21 | 13K | |
| layoutReads.mk | 2021-08-04 09:21 | 680 | |
| plotErrorProfile.pl | 2021-08-04 09:21 | 1.4K | |
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